STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MVIS_0631Siderophore biosynthesis protein, non-ribosomal peptide synthetase. (3592 aa)    
Predicted Functional Partners:
MVIS_0630
MbtH-family protein.
 
 
 0.994
MVIS_0629
ABC transporter, ATP-binding protein.
 
  
 0.913
pvdA
L-ornithine 5-monooxygenase.
 
 
 0.863
MVIS_3494
Cytochrome P450.
 
 
 0.830
MVIS_2998
ABC transporter, permease protein.
 
  
 0.810
pfaA
Putative polyunsaturated fatty acid synthase.
 
  
 0.801
fadD
acyl-CoA synthetase.
 
  
0.801
MVIS_2480
4'-phosphopantetheinyl transferase hetI; Belongs to the P-Pant transferase superfamily.
 
 
 0.797
iucB
Siderophore biosynthesis protein IucB.
 
     0.721
menF
Menaquinone-specific isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate.
  
  
 0.672
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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