Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MVIS_0645NUDIX hydrolase. (176 aa)    
Predicted Functional Partners:
MVIS_1589
Putative uncharacterized protein, endonuclease/exonuclease/phosphatase family.
 
     0.729
MVIS_0644
Glutamate synthase; Belongs to the glutamate synthase family.
       0.527
pfaC
Putative polyunsaturated fatty acid synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
   
 0.501
speE
Putative spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
  
     0.460
trpR
Trp operon repressor.
  
    0.459
MVIS_1477
Putative uncharacterized protein.
  
     0.458
MVIS_2670
Putative exported chitinase.
  
     0.456
MVIS_1427
Uncharacterized protein kinase.
  
     0.450
MVIS_0647
Putative aromatic amino acid transporter.
       0.449
MVIS_1841
Putative uncharacterized protein.
  
     0.438
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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