STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mltDMembrane-bound lytic murein transglycosylase D precursor. (534 aa)    
Predicted Functional Partners:
flgG
Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family.
  
 
 0.780
flgG-2
Flagellar basal-body rod protein FlgG (distal rod protein); Belongs to the flagella basal body rod proteins family.
  
 
 0.780
amiB
N-acetylmuramoyl-L-alanine amidase.
 
  
 0.680
MVIS_3691
Peptidase, M23/M37 family.
 
   
 0.653
MVIS_3555
Cell wall endopeptidase.
 
   
 0.637
gloB
Hydroxyacylglutathione hydrolase GloB; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
       0.631
MVIS_0662
Putative uncharacterized SAM-dependent methyltransferase.
     
 0.566
flgJ-2
Flagellar protein FlgJ.
     
 0.563
trpC
Tryptophan biosynthesis protein TrpCF.
  
   0.562
mltG
Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.
 
  
 0.535
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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