Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MVIS_0706Putative exported protein. (348 aa)    
Predicted Functional Partners:
MVIS_4100
Putative exported protein.
  
     0.741
MVIS_3548
Membrane protein.
  
     0.724
MVIS_0155
Putative flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
     0.670
MVIS_3321
cheW-like protein.
  
     0.646
MVIS_3048
Membrane protein.
  
     0.639
hda
DnaA-homolog protein hda; Belongs to the DnaA family. HdA subfamily.
       0.633
perM
Putative permease PerM.
 
     0.578
MVIS_4131
Putative cell division protein.
  
  
 0.540
MVIS_4349
Cytochrome c5.
  
     0.530
fliL-2
Polar flagellar protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
     0.527
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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