Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
flgMNegative regulator of flagellin synthesis FlgM, anti-sigma28 factor. (91 aa)    
Predicted Functional Partners:
lafS
RNA polymerase sigma factor for flagellar operon; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
    
  0.910
fliA
RNA polymerase sigma factor for flagellar regulon FliA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily.
     
  0.900
flgM-2
Anti-sigma-28 factor, FlgM.
     
  0.900
flgN
Polar flagellar FlgN, putative chaperone.
       0.773
flgA
Polar flagellar basal-body P-ring formation protein FlgA.
       0.551
flgB
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
       0.418
flgC
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
       0.418
flgD
Flagellar basal-body rod protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
       0.418
flgE
Flagellar hook protein FlgE.
       0.413
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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