STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MVIS_0793Response regulator. (406 aa)    
Predicted Functional Partners:
arcB-2
Response regulator, aerobic respiration control sensor protein ArcB.
 
 0.975
MVIS_2531
Sensor protein, histidine kinase.
 
 0.969
varS
Response regulator, histidine kinase VarS.
 
 0.952
MVIS_0204
Response regulator.
 
 0.902
MVIS_3053
Sensor protein, histidine kinase.
 
0.855
MVIS_1969
Membrane associated response regulator, histidine kinase.
 
 
 0.821
MVIS_1554
Sensor protein, histidine kinase.
 
0.817
MVIS_1829
Sensor protein, histidine kinase.
 
 
 0.805
MVIS_4032
Putative regulator, GGDEF family protein.
 
 
 0.796
MVIS_2114
Putative membrane associated signaling protein, GGDEF family protein.
 
 
0.760
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.