Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MVIS_0938Putative uncharacterized protein; No significant database matches. (667 aa)    
Predicted Functional Partners:
MVIS_0939
Putative uncharacterized protein; No significant database matches.
      0.930
MVIS_0681
Putative phospholipase.
   
    0.533
MVIS_0994
Putative hydrolase.
   
    0.533
MVIS_1339
Putative osmotically inducible protein.
   
    0.531
MVIS_2589
Putative uncharacterized protein, OsmC family.
   
    0.531
arcB-2
Response regulator, aerobic respiration control sensor protein ArcB.
   
 
 0.526
deoB
Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.
   
    0.518
MVIS_0937
Transposase, IS285 family; Required for the transposition of the insertion element.
       0.492
MVIS_0940
Putative membrane associated signaling protein, GGDEF family protein.
       0.478
varS
Response regulator, histidine kinase VarS.
     
 0.475
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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