STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MVIS_0965Putative uncharacterized protein. (322 aa)    
Predicted Functional Partners:
MVIS_0969
Putative exported protein.
  
     0.605
MVIS_0966
HTH-type transcriptional regulator, ArsR family.
       0.531
MVIS_2154
Transporter, MFS family.
  
     0.476
hutA
TonB-dependent heme receptor.
  
     0.473
MVIS_1484
Hemolysin.
  
     0.446
MVIS_2990
Peptide transporter.
  
     0.430
cadA
Lysine decarboxylase.
  
     0.425
MVIS_1050
Serine transporter.
  
     0.415
MVIS_2457
Putative exported protein, Endonuclease/Exonuclease/phosphatase family.
  
     0.408
mts2-AH
Putative type VI secretion ImpA related protein.
  
     0.403
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.