Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MVIS_0973Putative exported protein. (193 aa)    
Predicted Functional Partners:
MVIS_3130
Putative lipoprotein.
 
     0.800
MVIS_2471
Putative uncharacterized protein.
  
     0.773
MVIS_1552
Putative lipoprotein.
  
     0.768
MVIS_4141
Putative lipoprotein.
  
     0.763
MVIS_0969
Putative exported protein.
 
     0.654
MVIS_1806
Putative lipoprotein.
  
     0.477
MVIS_0972
Transposase, IS3 family IS51 group.
       0.470
MVIS_2457
Putative exported protein, Endonuclease/Exonuclease/phosphatase family.
  
     0.467
hutA
TonB-dependent heme receptor.
 
     0.452
MVIS_1484
Hemolysin.
  
     0.407
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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