STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MVIS_1069MFS transporter. (714 aa)    
Predicted Functional Partners:
pfaC
Putative polyunsaturated fatty acid synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
   
 0.679
pfaB
Putative polyunsaturated fatty acid synthase.
  
   
 0.661
pfaA
Putative polyunsaturated fatty acid synthase.
  
   
 0.574
MVIS_0803
Putative uncharacterized protein.
  
     0.548
MVIS_2081
Thioesterase.
  
     0.546
polB
DNA polymerase II.
       0.511
MVIS_1022
Membrane protein.
  
     0.501
MVIS_1949
Putative uncharacterized protein.
  
     0.501
MVIS_3144
Putative uncharacterized protein.
  
     0.456
MVIS_2873
Peptidase, M19 family.
  
     0.447
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.