STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MVIS_1372Putative uncharacterized protein. (392 aa)    
Predicted Functional Partners:
MVIS_1374
Glycosyl transferase, group 1.
     0.896
MVIS_1371
Mechanosensitive ion channel.
 
     0.884
MVIS_1375
Glycosyl transferase, group 1.
 
     0.871
MVIS_1376
Phosphoglycerate/bisphosphoglycerate mutase.
 
     0.817
MVIS_1826
ABC transporter, permease protein.
 
     0.782
MVIS_1373
Glycosyl transferase, group 1.
 
    
0.763
MVIS_1313
Glycosyl transferases group 1.
     0.582
MVIS_1478
Glycosyl transferase.
 
     0.478
MVIS_2709
Protein of unknown function DUF6, transmembrane.
  
     0.419
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.