Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MVIS_1565Putative uncharacterized protein. (267 aa)    
Predicted Functional Partners:
MVIS_1566
HTH-type transcriptional regulator, TetR family.
 
     0.859
MVIS_2457
Putative exported protein, Endonuclease/Exonuclease/phosphatase family.
 
     0.670
MVIS_0969
Putative exported protein.
  
     0.659
MVIS_3668
Putative ferredoxin.
  
   0.570
MVIS_2697
Peptidase, family M3.
 
   0.561
MVIS_4201
Ubiquinol--cytochrome c reductase, cytochrome C1.
   
    0.534
mts2-AH
Putative type VI secretion ImpA related protein.
  
     0.514
MVIS_2278
Pyridine nucleotide-disulphide oxidoreductase.
  
   0.507
MVIS_4261
O-antigen polymerase.
 
     0.491
pfaA
Putative polyunsaturated fatty acid synthase.
   
 
 0.482
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.