Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MVIS_1876Phage portal protein. (421 aa)    
Predicted Functional Partners:
MVIS_1878
Phage major capsid protein.
 
 
 
 0.975
MVIS_1877
Phage prohead protease.
 
   
 0.960
MVIS_1875
Phage terminase, large subunit.
 
   
 0.934
MVIS_1872
Putative uncharacterized phage endonuclease.
 
  
 0.846
MVIS_1879
Putative uncharacterized phage protein; No significant database matches.
  
 
 0.835
MVIS_1741
Putative uncharacterized protein, putative phage gene.
  
 
 0.757
MVIS_1948
Putative fibronectin type III domain containing lipoprotein.
  
 
 0.757
bglB
6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
   
   0.698
clpP
ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
  
  
 0.618
MVIS_1874
Phage terminase, small subunit.
       0.547
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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