STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MVIS_2004Capsid scaffolding protein. (308 aa)    
Predicted Functional Partners:
MVIS_2005
Phage major capsid protein, P2 family,Phage major capsid protein, P2 family.
 
  
 0.988
MVIS_1255
Terminase, ATPase subunit.
 
    0.970
MVIS_1257
Major capsid protein.
 
  
 0.961
MVIS_1254
Capsid portal protein.
 
    0.960
MVIS_2002
Phage portal protein; Similar to Vibrio phage K139 orf15.
 
    0.960
MVIS_1247
Phage replication protein.
  
    0.937
MVIS_1995
Phage replication protein.
  
    0.934
MVIS_2006
Phage small terminase subunit.
  
    0.912
MVIS_2014
Phage tail tape measure protein, TP901 family, core region,Phage-related minor tail protein.
 
    0.892
MVIS_3573
Putative resolvase.
  
    0.880
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.