Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MVIS_2238ABC-type multidrug transport system, ATPase and permease component. (595 aa)    
Predicted Functional Partners:
MVIS_0352
ABC transporter, ATP-binding protein.
0.849
MVIS_3514
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     
0.736
lpxK
Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).
 
  
 0.541
rtxB
RTX toxin transporter.
 
 
  
0.476
rtxE
RTX toxin secretion ATP-binding protein.
 
 
  
0.475
viuB
Siderophore utilization protein ViuB.
  
 
 0.464
pfaA
Putative polyunsaturated fatty acid synthase.
  
 
 0.464
MVIS_2237
Putative uncharacterized protein.
 
     0.416
MVIS_3161
Toxin ABC transporter, ATP-binding protein.
   
   0.404
kdsD
Arabinose 5-phosphate isomerase.
 
 
 
 0.400
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.