STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chbN,N'-diacetylchitobiase. (884 aa)    
Predicted Functional Partners:
nagE
PTS permease for N-acetylglucosamine and glucose.
 
  
 0.986
ptsG
PTS system, glucose-specific EIIBC component.
 
  
 0.986
nagZ
Putative antibiotic resistance protein; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily.
    
 0.931
nagK
N-acetyl-D-glucosamine kinase.
  
 
 0.918
crr
Glucose-specific phosphotransferase enzyme IIA component (PTS system).
 
  
 0.916
MVIS_3356
Putative lipoprotein.
    
 0.908
MVIS_3355
Putative lipoprotein.
     
  0.900
MVIS_1795
Chitin-binding protein.
  
   
 0.739
MVIS_1495
Histidine ammonia-lyase.
   
    0.690
hutH
Histidine ammonia-lyase.
   
    0.690
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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