STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MVIS_2249Cation transport ATPase, E1-E2 family. (797 aa)    
Predicted Functional Partners:
MVIS_2251
Membrane protein.
 
     0.941
MVIS_2248
Membrane protein.
 
    0.917
ccoS
Cbb3-type cytochrome oxidase maturation protein.
 
  
 0.914
MVIS_0017
Putative copper-exporting ATPase.
 
 
0.907
ccoP
Cbb3-type cytochrome c oxidase, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
   
 0.891
ccoO
Cbb3-type cytochrome c oxidase, subunit II.
 
   
 0.877
ccoN
Cbb3-type cytochrome c oxidase, subunit I; Belongs to the heme-copper respiratory oxidase family.
 
   
 0.865
MVIS_4391
Putative ferredoxin.
 
  
 0.727
fnr
Fumarate and nitrate reduction regulatory protein.
     
 0.717
ccoQ
Cbb3-type cytochrome c oxidase, subunit IV.
 
     0.680
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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