STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MVIS_2285Putative hydrolase. (256 aa)    
Predicted Functional Partners:
lip3
Lipase 3.
 
     0.689
MVIS_3090
Putative lipoprotein.
  
     0.672
pilA-2
Putative MSHA pilin protein MshA.
       0.623
MVIS_2711
Hydrolase, alpha/beta hydrolase fold.
  
     0.550
MVIS_1539
Putative hydrolase.
  
     0.502
apaH
Bis(5'nucleosyl)-tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
    
  0.474
MVIS_2283
Acetyltransferase, GNAT family.
       0.438
MVIS_2273
Putative hydrolase, alpha/beta fold.
  
     0.407
MVIS_0501
Putative 2-nitropropane dioxygenase.
  
    0.406
MVIS_2286
Transporter, MFS family.
       0.400
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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