STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MVIS_2619Acetyltransferase, GNAT family. (182 aa)    
Predicted Functional Partners:
MVIS_2626
Acetyltransferase GNAT family.
  
     0.764
MVIS_2287
Acetyltransferase, GNAT family.
  
   
 0.730
MVIS_3669
Putative ribosomal-protein-alanine acetyltransferase, (GNAT) family.
  
   
 0.721
MVIS_2618
Putative uncharacterized protein.
  
    0.707
MVIS_1421
Acetyltransferase, (GNAT) family.
 
   
 0.654
MVIS_2384
Putative ribosomal-protein-serine N-acetyltransferase.
  
   
 0.640
pvdA
L-ornithine 5-monooxygenase.
 
  
 0.595
MVIS_2620
Putative uncharacterized protein, ASCH domain.
 
     0.583
MVIS_2617
Putative uncharacterized protein; No significant database matches.
       0.566
rnc
Ribonuclease III (RNase III); Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
   
    0.519
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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