STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MVIS_2701HTH-type transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (293 aa)    
Predicted Functional Partners:
MVIS_3099
HTH-type transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.766
MVIS_3979
HTH-type transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.755
MVIS_0950
HTH-type transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.748
MVIS_1555
HTH-type transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.741
MVIS_0907
HTH-type transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.735
MVIS_2876
Transcriptional regulator, LysR-family; Belongs to the LysR transcriptional regulatory family.
  
     0.734
MVIS_1316
HTH-type transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.733
MVIS_2050
HTH-type transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.724
oxyR
Hydrogen peroxide-inducible genes activator; Belongs to the LysR transcriptional regulatory family.
  
     0.723
MVIS_3601
HTH-type transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.706
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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