Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MVIS_2702 | MVIS_2703 | MVIS_2702 | MVIS_2703 | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | HTH-type transcriptional regulator, TetR family. | 0.809 |
MVIS_2702 | MVIS_2969 | MVIS_2702 | MVIS_2969 | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Putative peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.458 |
MVIS_2702 | MVIS_3494 | MVIS_2702 | MVIS_3494 | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Cytochrome P450. | 0.583 |
MVIS_2702 | cysK | MVIS_2702 | MVIS_1219 | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.402 |
MVIS_2703 | MVIS_2702 | MVIS_2703 | MVIS_2702 | HTH-type transcriptional regulator, TetR family. | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.809 |
MVIS_2969 | MVIS_2702 | MVIS_2969 | MVIS_2702 | Putative peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.458 |
MVIS_2969 | MVIS_3494 | MVIS_2969 | MVIS_3494 | Putative peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | Cytochrome P450. | 0.996 |
MVIS_3494 | MVIS_2702 | MVIS_3494 | MVIS_2702 | Cytochrome P450. | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.583 |
MVIS_3494 | MVIS_2969 | MVIS_3494 | MVIS_2969 | Cytochrome P450. | Putative peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.996 |
cysK | MVIS_2702 | MVIS_1219 | MVIS_2702 | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.402 |