Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MVIS_2771Peptidase, C39 family. (201 aa)    
Predicted Functional Partners:
MVIS_2772
Membrane protein; No significant database matches.
       0.773
lifO-3
Lipase chaperone.
  
     0.525
MVIS_2773
Putative uncharacterized protein; No significant database matches.
       0.472
MVIS_2774
Putative exported protein; No significant database matches.
       0.436
flgC
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
   0.420
MVIS_2770
Transposase, IS6 family.
       0.420
flgC-2
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
   0.420
MVIS_2469
HTH-type transcriptional regulator, TetR family.
  
     0.412
MVIS_2174
Peptidoglycan binding protein.
 
    0.401
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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