STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mts2-ALPutative uncharacterized protein; No significant database matches. (193 aa)    
Predicted Functional Partners:
mts2-AM
Putative uncharacterized protein; No significant database matches.
       0.773
mts2-AK
Putative uncharacterized protein; No significant database matches.
       0.773
mts2-AJ
Putative uncharacterized protein.
       0.773
mts2-H
Putative type VI secretion protein VasF.
       0.757
mts2-G
Putative type VI secretion protein; 30% identical to VSAL_I1115.
       0.757
mts2-F
Putative type VI secretion lipoprotein; 27% identical to VSAL_I1116.
       0.746
mts2-E
Putative type VI secretion protein; Contains phosphopeptide binding motif FHA.
       0.746
mts2-AI
Putative type VI secretion system, exported protein.
       0.701
MVIS_2808
Putative uncharacterized protein.
       0.462
MVIS_2809
Putative uncharacterized protein; No significant database matches.
       0.462
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.