Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mts2-ZSigma-54 dependent transcriptional regulator. (533 aa)    
Predicted Functional Partners:
rpoN
RNA polymerase sigma-54 factor (sigma-N); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.801
mts2-X
Chaperone ClpB; Belongs to the ClpA/ClpB family.
  
  
 0.789
arcB-2
Response regulator, aerobic respiration control sensor protein ArcB.
   
 
 0.789
MVIS_0909
Putative membrane associated signaling protein, GGDEF family protein.
   
 
 0.538
MVIS_1829
Sensor protein, histidine kinase.
 
 
 
 0.509
gltB
Glutamate synthase, large subunit.
     
 0.505
varS
Response regulator, histidine kinase VarS.
   
 
 0.463
MVIS_0295
Membrane associated histidine kinase.
 
 
 
 0.452
norV
Anaerobic nitric oxide reductase flavorubredoxin.
     
 0.425
hmp
Flavohemoprotein; Belongs to the globin family.
     
 0.423
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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