STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MVIS_2869Response regulator. (636 aa)    
Predicted Functional Partners:
MVIS_3121
Putative exported protein.
  
     0.774
MVIS_1358
Sensor protein.
 
   0.756
MVIS_0909
Putative membrane associated signaling protein, GGDEF family protein.
 
   
 0.748
MVIS_1895
Putative regulator, GGDEF family protein.
   
 0.722
MVIS_2533
Putative response regulator, GGDEF family protein.
 
     0.716
MVIS_0516
Putative regulator, GGDEF family protein.
 
 
   0.707
MVIS_2685
Putative membrane associated signaling protein, GGDEF family protein.
 
     0.706
MVIS_3506
Putative membrane associated signaling protein, GGDEF family protein.
 
   
 0.677
MVIS_2945
Methyl-accepting chemotaxis protein.
 
 
 
 0.669
MVIS_2114
Putative membrane associated signaling protein, GGDEF family protein.
 
 
 0.659
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.