STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fruBPTS system, fructose-specific IIA/FPR component. (375 aa)    
Predicted Functional Partners:
ptsI
Phosphoenolpyruvate-protein phosphotransferase enzyme I (PTS system); General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).
 0.999
fruA
PTS system, fructose-specific IIBC component.
 
 0.999
fruK
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
  
 0.997
fruR
Fructose repressor.
 
 
 
 0.960
ptsH
Phosphocarrier protein Hpr, histidine-containing protein (PTS system).
 
 
0.958
crr
Glucose-specific phosphotransferase enzyme IIA component (PTS system).
 
 
 0.904
gntR
HTH-type transcriptional regulator GntR.
 
 
 
 0.864
rbsR
Ribose operon repressor.
 
 
 
 0.862
ptsG
PTS system, glucose-specific EIIBC component.
 
  
 0.772
nagE
PTS permease for N-acetylglucosamine and glucose.
 
  
 0.744
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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