Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
MVIS_3103Membrane protein. (296 aa)    
Predicted Functional Partners:
speE
Putative spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
 
     0.879
MVIS_4086
Phage shock protein A.
 
     0.800
MVIS_3104
Putative lipoprotein.
       0.757
MVIS_4363
Putative ion channel.
  
     0.703
MVIS_1589
Putative uncharacterized protein, endonuclease/exonuclease/phosphatase family.
  
     0.661
MVIS_1477
Putative uncharacterized protein.
  
     0.608
MVIS_0389
Membrane protein.
  
     0.597
MVIS_3004
Transporter, BCCT family.
  
     0.519
MVIS_3386
Putative exported protein.
  
     0.480
MVIS_3859
Putative uncharacterized protein.
  
     0.467
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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