Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MVIS_3140HTH-type transcriptional regulator, AsnC family. (138 aa)    
Predicted Functional Partners:
MVIS_0919
HTH-type transcriptional regulator, AsnC family.
  
     0.573
MVIS_0963
HTH_type transcriptional regulator, AsnC family.
  
     0.545
lysA-2
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
       0.510
MVIS_0233
HTH-type transcriptional regulator, AsnC family.
  
     0.506
MVIS_1139
Transcriptional regulator, AsnC family.
  
     0.500
lrp
Leucine-responsive regulatory protein.
  
     0.493
MVIS_3139
Putative uncharacterized protein.
       0.452
MVIS_0185
HTH-type transcriptional regulator, AsnC family.
  
     0.431
MVIS_3501
HTH-type transcriptional regulator, AsnC family.
  
     0.416
MVIS_3138
High-affinity nickel-transporter; Belongs to the NiCoT transporter (TC 2.A.52) family.
       0.414
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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