STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MVIS_3158Outer membrane protein. (198 aa)    
Predicted Functional Partners:
MVIS_3159
Outer membrane efflux protein.
 
 0.952
tolB
TolB protein precursor, periplasmic component; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 0.766
MVIS_2927
Outer membrane protein, OmpA family.
  
     0.754
MVIS_0936
Outer membrane protein.
  
     0.734
MVIS_3156
Putative membrane associated signaling protein, GGDEF family protein.
  
  
 0.733
MVIS_3160
Secretion protein, HlyD family.
 
  
 0.728
MVIS_3157
Putative uncharacterized protein.
     
 0.716
MVIS_3161
Toxin ABC transporter, ATP-binding protein.
  
  
 0.678
MVIS_0748
Outer membrane protein.
  
     0.655
MVIS_3492
Outer membrane protein.
  
     0.570
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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