STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MVIS_3218Bacteriophage Mu-like gp48 protein. (191 aa)    
Predicted Functional Partners:
MVIS_3219
Bacteriophage Mu-like gp47 protein, baseplate J-like family.
 
    0.955
MVIS_3222
Bacteriophage Mu-like baseplate protein.
 
    0.954
MVIS_3220
Bacteriophage Mu-like gp45 protein.
  
    0.820
MVIS_3221
Bacteriophage Mu-like gp45 protein.
  
    0.820
MVIS_3227
Bacteriophage Mu-like tail sheath protein.
 
  
 0.820
MVIS_3234
Bacteriophage Mu-like gp32 protein.
 
     0.789
MVIS_3256
Mu-like prophage transposase.
  
     0.770
MVIS_3237
Bacteriophage Mu-like gp29 protein.
 
     0.766
MVIS_3240
Bacteriophage Mu-like gp26 protein.
  
     0.760
MVIS_3246
Bacteriophage Mu-like gp16 protein.
  
     0.753
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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