STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MVIS_3237Bacteriophage Mu-like gp29 protein. (501 aa)    
Predicted Functional Partners:
MVIS_3238
Bacteriophage Mu-like gp28 protein.
 
    0.956
MVIS_3240
Bacteriophage Mu-like gp26 protein.
 
     0.949
MVIS_3236
Bacteriophage Mu-like gp30 protein.
 
    0.930
MVIS_3234
Bacteriophage Mu-like gp32 protein.
 
    0.885
MVIS_3246
Bacteriophage Mu-like gp16 protein.
 
    0.856
MVIS_3256
Mu-like prophage transposase.
 
  
 0.840
MVIS_3253
Putative uncharacterized phage gene.
 
    0.839
MVIS_3255
Bacteriophage Mu-like DNA transposition protein.
 
  
 0.824
MVIS_3239
Bacteriophage Mu-like gp27 protein.
  
    0.821
MVIS_3227
Bacteriophage Mu-like tail sheath protein.
 
     0.793
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.