STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ahpCAlkyl hydroperoxide reductase subunit C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. (185 aa)    
Predicted Functional Partners:
ahpF
Alkyl hydroperoxide reductase subunit F.
 
  
 0.986
MVIS_1214
Hybrid peroxiredoxin (thioredoxin reductase).
  
 0.893
MVIS_3172
Hybrid peroxiredoxin (thioredoxin reductase).
  
 0.893
trxB
Thioredoxin reductase.
  
 
 0.870
MVIS_1447
Putative thioredoxin.
  
 0.820
dsbE
Thiol:disulfide interchange protein DsbE (cytochrome c biogenesis protein CcmG).
  
 0.820
sodC
Superoxide dismutase [Cu-Zn].
   
 
 0.802
MVIS_1605
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 
 0.728
fur
Ferric uptake regulator protein; Belongs to the Fur family.
  
  
 0.720
sodB
Superoxide dismutase [Fe]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
  
 0.709
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.