STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MVIS_3383Putative aldose 1-epimerase; Belongs to the glucose-6-phosphate 1-epimerase family. (295 aa)    
Predicted Functional Partners:
pgmA
Phosphoglucomutase.
     
 0.913
ilvD
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
 
    0.912
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.911
crr
Glucose-specific phosphotransferase enzyme IIA component (PTS system).
  
  
  0.911
bglB
6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
     
  0.900
ptsG
PTS system, glucose-specific EIIBC component.
     
  0.900
MVIS_2266
Membrane-bound lytic murein transglycosylase B.
 
      0.899
MVIS_4126
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase.
    
 0.848
tktA
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
  
  
 0.830
MVIS_0875
DNA/RNA endonuclease.
    
   0.813
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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