STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
msrA-2Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (213 aa)    
Predicted Functional Partners:
MVIS_1120
Putative methionine sulfoxide reductase.
 
 0.993
MVIS_1447
Putative thioredoxin.
   
 0.778
dsbE
Thiol:disulfide interchange protein DsbE (cytochrome c biogenesis protein CcmG).
   
 0.778
MVIS_3406
Membrane protein.
       0.773
MVIS_0675
Putative uncharacterized GAF domain protein.
 
    
 0.760
MVIS_0191
Putative suppressor for copper-sensitivity B precursor.
   
 
 0.704
MVIS_1445
Cytochrome C biogenesis protein.
   
 
 0.704
argF
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
 
  
   0.671
MVIS_3408
Putative uncharacterized protein.
       0.658
grxA
Glutaredoxin 1.
  
 
 0.555
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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