STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
flaJPolar flagellar protein FliS (polar flagellar protein FlaJ). (140 aa)    
Predicted Functional Partners:
flgL-2
Flagellar hook-associated protein FlgL.
 
 
 0.989
fliD-2
Polar flagellar hook-associated protein 2 (HAP2) (flagellar cap protein); Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
 
 
 0.988
flgK-2
Flagellar hook-associated protein 1 FlgK; Belongs to the flagella basal body rod proteins family.
 
 
 0.977
flgL
Flagellar hook-associated protein type 3 FlgL.
 
 
 0.976
flgM-2
Anti-sigma-28 factor, FlgM.
 
 
 0.976
fliM-2
Polar flagellar switch protein FliM (flagellar motor switch protein FliM); FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
  
 0.971
fliE
Flagellar hook-basal body complex protein FliE.
 
 
 0.968
fliK-2
Polar flagellar hook-length control protein FliK.
 
  
 0.960
cheV
Chemotaxis protein methyltransferase CheV.
 
  
 0.956
fliH-2
Polar flagellar assembly protein FliH.
 
  
 0.955
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.