Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MVIS_3518Putative signaling protein, GGDEF family protein. (620 aa)    
Predicted Functional Partners:
MVIS_0524
Putative extracellular solute-binding protein.
 
      0.882
amtB
Ammonium transporter.
 
      0.827
varS
Response regulator, histidine kinase VarS.
 
  
 0.693
MVIS_2114
Putative membrane associated signaling protein, GGDEF family protein.
 
 
0.679
MVIS_1010
Putative membrane associated signaling protein, GGDEF family protein.
 
 
0.675
MVIS_4032
Putative regulator, GGDEF family protein.
 
 
0.662
cheR
Chemotaxis protein methyltransferase; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
 
      0.650
MVIS_0988
Putative uncharacterized HD domain protein.
 
  
 0.633
MVIS_4253
Putative membrane associated signaling protein, GGDEF family protein.
 
 
0.607
MVIS_2842
Putative membrane associated signaling protein, GGDEF family protein.
 
 
0.598
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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