STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MVIS_3532Exported peptidase, family M9. (852 aa)    
Predicted Functional Partners:
MVIS_2698
Putative exported serine protease.
 
  
 0.732
empA-2
Metalloprotease; Extracellular zinc metalloprotease.
  
  
 0.722
MVIS_1795
Chitin-binding protein.
 
  
 0.699
empA
Metalloprotease.
  
  
 0.692
MVIS_1264
Putative uncharacterized phage protein.
  
     0.619
MVIS_2012
Putative uncharacterized phage protein.
  
     0.619
MVIS_2457
Putative exported protein, Endonuclease/Exonuclease/phosphatase family.
  
   
 0.615
lipA2
Lipase.
  
     0.611
lipA-2
Lipase.
  
     0.600
MVIS_0685
Lipase.
  
     0.588
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.