Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MVIS_3548Membrane protein. (251 aa)    
Predicted Functional Partners:
MVIS_0706
Putative exported protein.
  
     0.724
erpA
Iron-sulfur cluster insertion protein; Required for insertion of 4Fe-4S clusters for at least IspG.
  
    0.671
MVIS_4178
Membrane associated zinc metallopeptidase, family M23.
  
     0.664
hemL
Glutamate-1-semialdehyde 2,1-aminomutase.
       0.595
MVIS_4100
Putative exported protein.
  
     0.541
MVIS_3058
Putative uncharacterized protein.
  
     0.524
MVIS_0056
Putative uncharacterized protein.
  
     0.519
MVIS_3048
Membrane protein.
  
     0.519
MVIS_2570
Membrane protein, rhomboid family.
  
     0.506
epsM
General secretion pathway protein M; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
     0.505
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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