STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MVIS_3566Restriction-modification system protein. (419 aa)    
Predicted Functional Partners:
MVIS_3565
Restriction-modification system protein.
 
 
 0.997
MVIS_3568
Type I restriction enzyme R; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.986
MVIS_4377
Type I restriction-modification system, N-6 adenine-specific DNA methylase.
 
 
 0.969
MVIS_4376
Type I restriction-modification system, DNA methylase.
  
 
 0.961
MVIS_3564
Putative uncharacterized protein.
 
     0.941
MVIS_4378
Type I restriction-modification system, restriction endonuclease.
  
 
 0.904
MVIS_3569
Putative uncharacterized protein.
 
     0.881
MVIS_2365
Putative helicase.
  
 
 0.861
MVIS_0639
Putative uncharacterized protein.
  
  
 0.637
atpF
ATP synthase B chain; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
   
 
 0.463
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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