STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MVIS_3614Putative semialdehyde dehydrogenase. (217 aa)    
Predicted Functional Partners:
MVIS_2278
Pyridine nucleotide-disulphide oxidoreductase.
  
 0.968
dgk
Deoxyguanosine kinase.
  
 0.963
MVIS_3668
Putative ferredoxin.
   
 0.960
MVIS_4201
Ubiquinol--cytochrome c reductase, cytochrome C1.
   
 
 0.923
pfaA
Putative polyunsaturated fatty acid synthase.
   
 0.914
aoxA
Arsenite oxidase, small subunit.
  
 
 0.910
MVIS_4203
Ubiquinol-cytochrome c reductase iron-sulfur subunit (rieske iron-sulfur protein); Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.910
MVIS_0485
Exported pepdidase, M16 family.
  
 
 0.895
MVIS_1488
Acyl carrier protein.
   
 0.870
MVIS_1489
Acyl carrier proteins.
   
 0.870
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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