Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
wzbLow molecular weight protein-tyrosine-phosphatase. (143 aa)    
Predicted Functional Partners:
wza
Polysaccharide export protein.
  
 0.941
wzc
Lipopolysaccharide biosynthesis protein.
 
 
 0.934
MVIS_2896
Putative arsenical-resistance protein.
  
  
 0.759
trxA
Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.699
trxA-2
Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.699
trxA-3
Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.699
MVIS_3269
Putative thioredoxin.
  
 
 0.699
MVIS_3358
Putative exported protein.
  
 
 0.699
hflC
HflC protein; HflC and HflK could regulate a protease.
  
    0.691
engB
Probable GTP-binding protein engB; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
  
    0.603
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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