Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
gcvAGlycine cleavage system transcriptional activator; Belongs to the LysR transcriptional regulatory family. (302 aa)    
Predicted Functional Partners:
MVIS_2050
HTH-type transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.676
MVIS_2892
Transcriptional regulator, LysR-family; Belongs to the LysR transcriptional regulatory family.
  
     0.676
MVIS_2489
HTH-type transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.621
MVIS_2876
Transcriptional regulator, LysR-family; Belongs to the LysR transcriptional regulatory family.
  
     0.598
fadR
Fatty acid metabolism regulator protein; Multifunctional regulator of fatty acid metabolism.
  
    0.584
rlmM
Ribosomal RNA large subunit methyltransferase M; Catalyzes the 2'-O-methylation at nucleotide C2498 in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily.
      0.575
MVIS_1637
UPF0352 protein; Belongs to the UPF0352 family.
  
     0.574
oxyR
Hydrogen peroxide-inducible genes activator; Belongs to the LysR transcriptional regulatory family.
  
     0.574
MVIS_0907
HTH-type transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.542
MVIS_0838
HTH-type transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.506
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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