STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MVIS_3969ABC transporter, extracellular solute-binding protein. (311 aa)    
Predicted Functional Partners:
MVIS_3968
Putative membrane associated signaling protein, GGDEF family protein.
 
     0.820
MVIS_3970
Putative exported aminotransferase, class V.
 
     0.669
MVIS_0969
Putative exported protein.
 
     0.574
MVIS_2154
Transporter, MFS family.
  
     0.456
mts2-E
Putative type VI secretion protein; Contains phosphopeptide binding motif FHA.
  
     0.447
mts2-AC
Putative uncharacterized protein.
  
     0.446
MVIS_0536
Membrane protein.
  
     0.438
MVIS_2990
Peptide transporter.
  
     0.436
argH
Bifunctional protein ArgH; In the N-terminal section; belongs to the lyase 1 family. Argininosuccinate lyase subfamily.
 
  
 0.435
MVIS_4429
Amino acid ABC transporter, permease protein.
 
 
 0.425
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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