STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MVIS_3983Permease. (419 aa)    
Predicted Functional Partners:
MVIS_3984
ABC transporter, ATP-binding protein.
 
 
 0.992
MVIS_3982
Membrane protein.
 
     0.957
MVIS_3985
Putative exported protein.
 
     0.920
MVIS_2900
ABC transporter, ATP-binding component.
 
 
 0.861
lolD
Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.
  
 
 0.856
MVIS_2715
ABC transporter, ATPase component.
  
 
 0.856
MVIS_2175
Putative lipoprotein.
    
 
 0.672
MVIS_3986
Putative uncharacterized protein.
       0.518
lolB
Outer-membrane lipoprotein LolB precursor; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.
    
 
 0.514
MVIS_0523
Putative lipoprotein.
    
   0.461
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.