Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MVIS_4044Putative peroxidase/antioxidant. (200 aa)    
Predicted Functional Partners:
ahpF
Alkyl hydroperoxide reductase subunit F.
  
  
 0.903
MVIS_1214
Hybrid peroxiredoxin (thioredoxin reductase).
  
 0.893
MVIS_3172
Hybrid peroxiredoxin (thioredoxin reductase).
  
 0.893
trxB
Thioredoxin reductase.
  
 
 0.870
MVIS_1447
Putative thioredoxin.
  
 0.820
dsbE
Thiol:disulfide interchange protein DsbE (cytochrome c biogenesis protein CcmG).
  
 0.820
sodC
Superoxide dismutase [Cu-Zn].
   
 
 0.802
MVIS_1605
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 
 0.728
fur
Ferric uptake regulator protein; Belongs to the Fur family.
  
  
 0.720
sodB
Superoxide dismutase [Fe]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
  
 0.709
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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