STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MVIS_4053Carbohydrate kinase, FGGY family. (534 aa)    
Predicted Functional Partners:
glpD-2
Aerobic glycerol-3-phosphate dehydrogenase.
  
 0.949
MVIS_4051
Alkyl-dihydroxyacetonephosphate synthase.
 
   
 0.945
ptsH
Phosphocarrier protein Hpr, histidine-containing protein (PTS system).
    
 
 0.797
glpA
Anaerobic glycerol-3-phosphate dehydrogenase subunit A.
 
  
 0.742
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
  
 
 0.646
MVIS_4050
HTH-type transcriptional regulator, AraC family.
 
   
 0.606
fruB
PTS system, fructose-specific IIA/FPR component.
    
 
 0.588
fruA
PTS system, fructose-specific IIBC component.
     
 0.578
rpe
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
    
 
 0.562
glpD
Aerobic glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.550
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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