Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
fbpCiron(III) ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (351 aa)    
Predicted Functional Partners:
fbpB
iron(III) ABC transporter, permease protein.
 0.994
potB
Spermidine/putrescine ABC transporter, permease.
 
 0.981
fbpA
iron(III) ABC transporter, periplasmic iron-compound-binding protein.
 
 
 0.970
potC
Spermidine/putrescine ABC transporter, permease.
 
 
 0.960
MVIS_3958
ABC transporter, permease protein.
 
 
 0.937
MVIS_0351
ABC transporter, permease.
 
 0.924
MVIS_0352
ABC transporter, ATP-binding protein.
  
  
 
0.908
sapD
Peptide transport system ATP-binding protein sapD; Belongs to the ABC transporter superfamily.
 
    
0.908
MVIS_1798
ABC transporter ATP-binding protein.
 
     
0.887
potD
Spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
 
 0.872
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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