Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
mshEType IV pilus, mannose-sensitive hemagglutinin E (MSHE). (636 aa)    
Predicted Functional Partners:
mshG
Type IV pilus, mannose-sensitive hemagglutinin protein.
 
 
 0.979
epsF
General secretion pathway protein F.
 
 
 0.953
pilC
Type IV pilus assembly protein PilC.
 
 
 0.953
mshD-2
Type IV pilus, mannose-sensitive hemagglutinin D (MSHD).
 
  
 0.926
pilD
Type IV prepilin peptidase PilD (type IV-A prepilin peptidase PilD) (leader peptidase PilD); Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
 
 0.903
epsL
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
 
 0.891
mshI2
Type IV pilus, mannose-sensitive hemagglutinin D (MSHI).
  
 
 0.876
mshI1
Type IV pilus, mannose-sensitive hemagglutinin D (MSHI).
 
 
 
 0.869
mshJ
Type IV pilus, mannose-sensitive hemagglutinin D (MSHJ).
 
  
 0.824
epsG
General secretion pathway protein G.
 
 
 0.822
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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