Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MVIS_4246Type IV pilus, mannose-sensitive hemagglutinin D (MSHN). (380 aa)    
Predicted Functional Partners:
mshD-2
Type IV pilus, mannose-sensitive hemagglutinin D (MSHD).
 
     0.950
mshJ
Type IV pilus, mannose-sensitive hemagglutinin D (MSHJ).
 
     0.948
mshI1
Type IV pilus, mannose-sensitive hemagglutinin D (MSHI).
 
     0.947
mshM
Type IV pilus, mannose-sensitive hemagglutinin D (MSHM).
     0.904
mshA1
Type IV pilus, mannose-sensitive hemagglutinin A.
 
     0.812
mshE
Type IV pilus, mannose-sensitive hemagglutinin E (MSHE).
 
     0.807
mshD
Type IV pilus, prepilin-like protein (MSHD).
 
     0.805
mshI2
Type IV pilus, mannose-sensitive hemagglutinin D (MSHI).
       0.789
mshK
Type IV pilus, mannose-sensitive hemagglutinin D (MSHK).
       0.785
mshA3
Type IV pilus, mannose-sensitive hemagglutinin A.
 
     0.763
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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