Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mshI1Type IV pilus, mannose-sensitive hemagglutinin D (MSHI). (297 aa)    
Predicted Functional Partners:
mshI2
Type IV pilus, mannose-sensitive hemagglutinin D (MSHI).
  
 
 0.976
mshJ
Type IV pilus, mannose-sensitive hemagglutinin D (MSHJ).
 
     0.957
mshD-2
Type IV pilus, mannose-sensitive hemagglutinin D (MSHD).
 
  
 0.954
MVIS_4246
Type IV pilus, mannose-sensitive hemagglutinin D (MSHN).
 
     0.947
mshM
Type IV pilus, mannose-sensitive hemagglutinin D (MSHM).
 
    0.911
pilN
Fimbrial assembly protein PilN.
  
 
 0.884
mshE
Type IV pilus, mannose-sensitive hemagglutinin E (MSHE).
 
 
 
 0.869
mshG
Type IV pilus, mannose-sensitive hemagglutinin protein.
 
 
 
 0.854
mshA1
Type IV pilus, mannose-sensitive hemagglutinin A.
 
    0.840
mshP
Exported protein MshP.
 
   
 0.823
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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